[Bioperl-l] locuslink

Hilmar Lapp hlapp@gnf.org
Thu, 31 Oct 2002 14:14:16 -0800


We have a SeqIO LocusLink parser that Keith Ching wrote. Basically 
the record ends up as an empty Bio::SeqI with lots of annotation 
attached.

Right now the status is that it works for us, but there's lots of 
room for improvement, as the entry cannot be regenerated from the 
resulting SeqI object (the connection between tags and dblinks gets 
lost for example). Would anyone have a problem with us committing 
this? Does anyone see a better place for this than SeqIO?

	-hilmar
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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