[Bioperl-l] bioperl dna pairwise local alignment

[Elia Stupka]

> Has anyone linked the water.c code from EMBOSS into perl ?
> Are there any other perl modules anyone knows about which do this?

No, but you can run EMBOSS within bioperl, see the synopsys of the EMBOSS
module, Bio::Factory::EMBOSS, which has an example using water...

Elia

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