[Bioperl-l] Behavior of Bio::Species object

Michael Muratet mam@torchconcepts.com
Mon, 21 Oct 2002 05:42:33 -0500


> 
> Michael - you are seeing the hard end of trying to get bioperl to work
> - we want to normalise information but also want to as close as
> possible"round trip" (recreate exactly) the flat files and have all
> the information to hand.
> 
> As it happens, on the species object I believe there is the method
> "binomial_name" which gives the genus species from the classification,
> not parsing the common name slot
> 

Elia & Ewan

I see your point. It's easy enough (and it works) to create a new
Bio::Species object and strip out the bits (genus and species, and
classification) I want. Thanks.

Mike