[Bioperl-l] chgs to seqfeature::generic

Jason Stajich jason@cgt.mc.duke.edu
Sat, 19 Oct 2002 08:54:12 -0400 (EDT)


Hilmar -

Glad you implemented the changes - One question, if we're requiring
-seq_id now instead of -seqname - should we try and trap both as inputs
since it requires people to change their code - we could warn about
deprecation if people use -seqname or just accept both as inputs.

I can implement this, I just think it will help me catch all the cases in
my code where I have used -seqname.  I imagine we have Ensembl initing
seqfeature::Generic objects this way as well so perhaps we should accept
either as an input but warn on both being set.

-jason

-- 
Jason Stajich
Duke University
jason at cgt.mc.duke.edu