[Bioperl-l] Seq objects from string

Mick Watson michaelwatson@paradigm-therapeutics.co.uk
Fri, 18 Oct 2002 14:34:19 +0100


Hi

I realise I'm at risk of being "flamed" here for asking a question thats 
been answered before, but can anyone give me a quick pointer on how to 
use SeqIO with my sequences (formatted as Fasta) as a string held in a 
variable, $sequence.

I know i can use Bio::Seq->new('-seq'=>'$sequence' .... etc but I have 
many sequences in a single string and I quite like the idea that SeqIO 
might parse it for me.

Thanks
Mick