[Bioperl-l] value problem with EMBOSS

[Brian Osborne]

Ginger,

Since we can't see your code it's hard to tell what's wrong but there's a
script that demonstrates how to use EMBOSS's water and needle programs, it's
called aligntutorial.pl and it's in the examples/ directory.

Brian O.

-----Original Message-----
From: bioperl-l-admin@bioperl.org [mailto:bioperl-l-admin@bioperl.org]On
Behalf Of Ze Cheng
Sent: Wednesday, May 08, 2002 1:53 PM
To: bioperl-l@bioperl.org
Subject: [Bioperl-l] value problem with EMBOSS

Hello,
     I am wondering if someone has encountered a problem before with the
water or needle alignment of EMBOSS of bioperl. When I use it today, the
repsonse I get is sth about uninitialized value of appliation. I do put
'water' in the program call and it totally knocks me out how come i got
this. Thank you all for help.
     ginger

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