[Bioperl-l] bioperl-db install doing more than burping

Elia Stupka elia@fugu-sg.org
Thu, 14 Mar 2002 10:10:51 +0800 (SGT)

> and gcc 3.0.2.  The patient did more than burp, I'm afraid, in
> fact, I'm going to spray the output from make test (make

Hi Keith, just to make sure things are clear...

bioperl-db at the moment works wonderfully, but forget about the test

In other words, after you follow the instructions and thus download the
main trunk of bioperl-db, you should be able to use load_seqdatabase.pl
without any problem, but don't try making tests.

Also, you need to checkout the sql schema from biosql-schema cvs module in
the biosql cvs repository. There is no more schema directly inside
bioperl-db because the database is now being used across languages.

But believe me, it's perfectly fine, I've loaded all of swissprot
yesterday... ;)


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