[Bioperl-l] bioperl-db

[Ewan Birney]

On Wed, 13 Mar 2002, Heikki Lehvaslaiho wrote:

> 
> 
> I still like the idea of using Parse::RecDescent, but it is not (yet) a
> viable option for Bio::SeqIO.
> 

Bugger.


However moving the SeqIO system to an event based system will allow
plugging in a new Parser much easier. However we would have to rewrite the
current system into events. 


Hmmmm. Probably worth it. 1.2 issue of course!



> 
> 	-Heikki
> 
> 
> 
> 
> 
> 
> > I briefly looked into writing a traditional C-based, compiled yacc grammar
> > (which could then be bootstrapped in via Inline::C), but as always, my
> > thesis committee somehow thinks that real experiments are more important
> > than open source software :(
> > 
> > -Aaron
> > 
> > --
> >  Aaron J Mackey
> >  Pearson Laboratory
> >  University of Virginia
> >  (434) 924-2821
> >  amackey@virginia.edu
> > 
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l@bioperl.org
> > http://bioperl.org/mailman/listinfo/bioperl-l
> 
> -- 
> ______ _/      _/_____________________________________________________
>       _/      _/                      http://www.ebi.ac.uk/mutations/
>      _/  _/  _/  Heikki Lehvaslaiho          heikki@ebi.ac.uk
>     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
>    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
>   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
>      _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
> ___ _/_/_/_/_/________________________________________________________
> 

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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
<birney@ebi.ac.uk>. 
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