[Bioperl-l] Command for limiting blast descriptions
Brad Chapman
chapmanb@arches.uga.edu
Mon, 11 Mar 2002 21:57:42 -0500
Hi Martin;
> Does anyone know the command to limit the number of descriptions and/ or
> alignments generated by blast.
This definitely isn't a bioperl-relevant question at all, but 'cause
I'm such a darn nice guy...
Running 'blastall' with no arguments lists all possible arguments
for BLASTing:
-v Number of database sequences to show one-line descriptions for
(V) [Integer]
default = 500
-b Number of database sequence to show alignments for (B)
[Integer]
default = 250
Hope this helps.
Brad
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