[Bioperl-l] blast error (ncbiapi [000.000])

William Hsiao wlhsiao@yahoo.ca
Wed, 16 Jan 2002 15:00:59 -0800 (PST)


I wrote a script to carry out some blast using
StandAloneBlast and output with BPlite.  When I run
the script and get the results of the blast but at the
same time, I get the following errors.

[blastall] ERROR: ncbiapi [000.000] 176_00:
SeqPortNew: dbj|BA000007|:C1083197-1080915, start
(2740 >= len(2283)

[blastall] ERROR: ncbiapi [000.000] 176_00:
SeqPortNew: dbj|BA000007|:C1083197-1080915, start
(2740 >= len(2283)

The same message appears twice.  The database is built
from the ncbi genome sequence file (fna files) and the
input sequence is a single FASTA entry.  Does anyone
know what might cause such error message.  Moreover,
does it affect the output (i.e. is the output I get
still correct)?

Please help as I couldn't find any information
regarding the error through a google search.

Thanks


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