[Bioperl-l] blast error (ncbiapi [000.000])

[Jurgen Pletinckx]

# I wrote a script to carry out some blast using
# StandAloneBlast and output with BPlite.  When I run
# the script and get the results of the blast but at the
# same time, I get the following errors.
# 
# [blastall] ERROR: ncbiapi [000.000] 176_00:
# SeqPortNew: dbj|BA000007|:C1083197-1080915, start
# (2740 >= len(2283)

I've had that kind of error before, when using the
actual Blast executables. In that case, there were
formatting issues with the db indices (perhaps mul-
tiple entries with identical taglines?). The 
formatdb logfiles should be of help, if  you can 
access them.

-- 
Jurgen Pletinckx
AlgoNomics NV