[Bioperl-l] Re: [Bioperl-guts-l] Notification: incoming/1061

[Jason Stajich]

You'll need to either wait till bioperl 1.0 comes out in Feb or download
the developer release 0.9.3.  We've already fixed this in main trunk code,
but unfortunately NCBI turned off the old cgi before our next stable
release came out.

-jason
On Wed, 16 Jan 2002 bioperl-bugs@bioperl.org wrote:

> JitterBug notification
>
> new message incoming/1061
>
> Message summary for PR#1061
> 	From: Volker Brendel <vbrendel@iastate.edu>
> 	Subject: none
> 	Date: Wed, 16 Jan 2002 13:41:30 -0600
> 	0 replies 	0 followups
>
> ====> ORIGINAL MESSAGE FOLLOWS <====
>
> >From vbrendel@iastate.edu Wed Jan 16 14:35:26 2002
> Received: from mailhub-1.iastate.edu ([129.186.140.3])
> 	by pw600a.bioperl.org (8.11.2/8.11.2) with ESMTP id g0GJZLA31095
> 	for <bioperl-bugs@bio.perl.org>; Wed, 16 Jan 2002 14:35:25 -0500
> Received: from [129.186.219.79] (golem.zool.iastate.edu [129.186.219.79])
> 	by mailhub-1.iastate.edu (8.9.3/8.9.3) with ESMTP id NAA31544
> 	for <bioperl-bugs@bio.perl.org>; Wed, 16 Jan 2002 13:41:33 -0600
> Mime-Version: 1.0
> X-Sender: vbrendel@vbrendel.mail.iastate.edu
> Message-Id: <p05010400b86b872f2ffd@[129.186.219.79]>
> Date: Wed, 16 Jan 2002 13:41:30 -0600
> To: bioperl-bugs@bio.perl.org
> From: Volker Brendel <vbrendel@iastate.edu>
> Content-Type: text/plain; charset="us-ascii" ; format="flowed"
>
> I did not see my web submission tracked, so here it is using ordinary email:
>
> Subject: NCBI Entrez
> Module:  NCBIHelper.pm
> Version: 0.7.2
> Perl:    5.6.0
> OS:      Linux
>
> I cannot retrieve sequences from NCBI using bioperl (problem noted as
> of Jan. 16, 2002).
>
> I suspect this is because /cgi-bin/qserver.cgi has been discontinued at NCBI.
>
> Thanks, Volker
>

-- 
Jason Stajich
Duke University
jason@cgt.mc.duke.edu