[Bioperl-l] error/warning messages while using pSW.pm

[Ewan Birney]

This is deep errors from my Wise2 package. 

I guess that you are using very very large bits of DNA that are almost
identical and that therefore Wise2 is having integer overflow problems


I would suggest switching to exonerate or crossmatch as your alignment
engine -- it will also go faster!



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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
<birney@ebi.ac.uk>. 
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