[Bioperl-l] Re: collaborations

[Elia Stupka]

> Just talking about group of protein sequences, which looks like 
> protein families :), I plan (for after NCBI28 Ensembl release) to work 
> on multiple alignments of protein families using clustalw combined with 
> T-coffee, or T-coffee alone. :) 

That is exactly where we are heading, and where Jason Stajich is working a
lot too. We would draw trees from groups of orthologues and paralogues
that we spot during our synteny finding process. 

We need to get to work together on this,

more on Monday, otherwise I'll miss my flight

Elia 

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