[Bioperl-l] Does latest Bundle::BioPerl contan Text::Shellwords?
Jason Stajich
jason@cgt.mc.duke.edu
Mon, 12 Aug 2002 18:39:34 -0400 (EDT)
On Mon, 12 Aug 2002, chris dagdigian wrote:
>
> The Bundle::BioPerl package does contain Text::Shellwords but it does
> not seem to be working (I noticed this as well this weekend) -- perhaps
> there is a problem with something like a newline or tab. I'll check this
> out.
>
> The source of the Bundle::BioPerl.pm file is here:
> http://search.cpan.org/src/CRAFFI/Bundle-BioPerl-2.03/BioPerl.pm
>
> What module has the dependency on XML::DOM ? Does that need to be added
> to the Bundle as well?
Bio::SeqIO::bsml -- but I'd very much like to see this re-written not
to use XML::DOM
>
> -Chris
>
>
> Hilmar Lapp wrote:
> > While we're at it, I noticed recently that you need XML::DOM, and at least Makefile.PL doesn't point that out. I don't know about the Bundle though.
> >
> > -hilmar
> >
> >
> >>-----Original Message-----
> >>From: Brian Osborne [mailto:brian_osborne@cognia.com]
> >>Sent: Monday, August 12, 2002 12:54 PM
> >>To: bioperl-l@bioperl.org
> >>Subject: [Bioperl-l] Does latest Bundle::BioPerl contan
> >>Text::Shellwords?
> >>
> >>
> >>Bioperl-l,
> >>I just used Bundle::BioPerl and it looks like Text::Shellwords wasn't
> >>installed. Is the bundle up-to-date?
> >>Thanks again,
> >>Brian O.
> >>
> >>
> >>
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> >>
> >
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>
>
>
--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu