[Bioperl-l] web interface parsers
Tania Oh Wei Ling
gisoht@nus.edu.sg
Tue, 6 Aug 2002 17:55:16 +0800
Hi all,
Are pple interested in putting drivers for web interfaces in bioperl?
I was trying to get hold of a program called ATGpr but was unable to do
so. http://www.hri.co.jp/atgpr
And what it does is predict the ATG site based on Kozak's criteria.
If pple think it's useful, I'll cvs commit code. Both the driver (into
Bio::DB on Bioperl live) and the runnable (into bioperl-run )
What the driver does is make a connection and then get the result which
is parsed into an array of Bio::SeqFEature::Generic objects
Cheers
tania