[Bioperl-l] Re: question for BPlite

[Jason Stajich]

Accessed through the HSP object in BPlite:

$hsp->hit->length will return the subject/hit length.
$hsp->query->length will return the query length.

On Mon, 22 Apr 2002, zhang yueqing wrote:

> Dear Sir:
>   I have successfully parsed my blast result with your excellent
> "BPlite" bioperl module.Your module saved me a lot of time,so,thanks!
> But I still have one question;  I could't get the "subject length",in
> another words,it shows "L = xxx" in the blast result.Can you tell me?
>   Best!
>                                              yqzhang
>
>
>

-- 
Jason Stajich
Duke University
jason@cgt.mc.duke.edu