[Bioperl-l] Unigene proposal and basic implementation

Kris Boulez Kris.Boulez@algonomics.com
Tue, 16 Apr 2002 12:04:02 +0200


Quoting Ewan Birney (birney@ebi.ac.uk):
> > I've modeled this on SeqIO and SeqIO/fasta.pm. So I''ve made the
> > Bio::Cluster::UniGene::unigene.pm the format module for
> > Bio::Cluster::UniGene.pm.
> 
> Can we make the directory Bio::Cluster::ClusterIO therefore?
> 

The situation now isn't really consequent (to we want to be consequent
anyway :) ).

We have 

Bio::AlignIO
     AnnSeqIO
     MapIO
     SearchIO
     SeqIO
     TreeIO

but also

Bio::LiveSeq::IO
     Variation::IO
     Structure::IO
     Biblio::IO


What do people think about Bio::IO ?

Kris,