[Bioperl-l] moltype/molecule
Hilmar Lapp
hlapp@gmx.net
Sun, 21 Oct 2001 23:42:07 -0700
Heikki Lehvaslaiho wrote:
>
>
> - add new method into PrimarySeqI: is_circular (HEAD)
> -- values (from ID/LOCUS line): undef/false, true
> -- update genbank.pm and embl.pm to parse in circularity
> -- update genbank.pm and embl.pm to write out circularity
>
Sounds good.
> - change moltype() into alphabet(), keep moltype() as a depreciated method
> (HEAD only) Opinions?
Hm. I bet a /lot/ of people have been using $seq->moltype().
alphabet() sounds like the better name though. No-one's been
shouting so far ...
-hilmar
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Hilmar Lapp email: hilmarl@yahoo.com
San Diego, Ca. 92130 phone: +1 858 812 1757
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