[Bioperl-l] bugs in the queue
Jason Eric Stajich
jason@cgt.mc.duke.edu
Wed, 10 Oct 2001 14:45:06 -0400 (EDT)
We've got a few bugs in queue that should be easy fixes - would be great
if anyone wanted to volunteer and help out here.
Here are some highlights:
1017 - add a length method to BPlite::Sbjct [fix on HEAD]
1014 - RestrictionEnzyme fix (evaluate if proposed fix is correct)
[Fix on branch and HEAD]
1013 - README/Installation direction need to be evaluated for clarity
wrt Compile/SW directory
[Fix on branch and HEAD]
1012 - exe path needs to be set at run time not include/compile time
In ClustalW/TCoffee. This dovetails into standardization of
wrappers around exec-ing external apps
[Fix on HEAD]
1007 - Verify that Swissprot does break when parsing some dbs -
Need rigid full roundtrips of large dbs like embl/swissprot/genbank
to test all SeqIO modules. [Fix on branch and HEAD]
--
Jason Stajich
Duke University
jason@cgt.mc.duke.edu