[Bioperl-l] bugs in the queue

Jason Eric Stajich jason@cgt.mc.duke.edu
Wed, 10 Oct 2001 14:45:06 -0400 (EDT)

We've got a few bugs in queue that should be easy fixes - would be great
if anyone wanted to volunteer and help out here.

Here are some highlights:

1017 - add a length method to BPlite::Sbjct [fix on HEAD]

1014 - RestrictionEnzyme fix (evaluate if proposed fix is correct)
	[Fix on branch and HEAD]
1013 - README/Installation direction need to be evaluated for clarity
       wrt Compile/SW directory
	[Fix on branch and HEAD]
1012 - exe path needs to be set at run time not include/compile time
       In ClustalW/TCoffee.  This dovetails into standardization of
       wrappers around exec-ing external apps
       [Fix on HEAD]
1007 - Verify that Swissprot does break when parsing some dbs -
       Need rigid full roundtrips of large dbs like embl/swissprot/genbank
       to test all SeqIO modules.  [Fix on branch and HEAD]

Jason Stajich
Duke University