[Bioperl-l] Re: translation using Bioperl

[hilmar.lapp@pharma.Novartis.com]

used. That means that even when using the standard codon table, the
correct translation of the sequence 'AGT TGA ...' is 'MV...'.

I've fixed this in bioperl live and 06 CVS branches.

If you want to catch those cases where translation is NOT started by a
valid initiator codon, you can now set ->verbose to true in your
PrimarySeq object and it will warn you.

     -Heikki