[Bioperl-l] Bio::Tools::BPlite
Lorenz Pollak
lorenz@ist.org
Sat, 15 Jul 2000 12:57:36 +0200 (CEST)
> There is a massive advantage here, as alot of the systems in
Nice to hear! :-)
> Bio::Seq/Bio::SeqIO rely on things inherieting from Bio::SeqFeatureI - you
> should also set primary_tag and source_tag to sensible values.
for the query feature:
primary_tag = "blast_query"
source_tag = $report->query (ac, id or name supplied with the query)
for the sbjct feature:
primary_tag = "blast_sbjct"
source = $sbjct->name (ac, id, name of sbjct)
how about these?
> Have you added a BPLite specific test?
I will do that in the next days.
(along with adding docs and some minor
enhancements like using hashed constructors
in all three modules)
kind regards,
Lorenz