Bioperl: Re: FYI: Error:: Perl module

[Steven E. Brenner]

> I think Joe Ryan's recent suggestion about a Blast:: module 
> name space makes alot of sense. My module would be more appropriately named 
> Blast::Parse.pm since it has no methods for executing BLAST runs. My 
> module also relies on two helper modules which could go in this name 
> space.
> 

I think it should be Something::Blast, as there are other analogous
routines for sequence comparison result parsing and processing.

Indeed, my routines for FASTA, SSEARCH, MSP-CRUNCH, BLAST, WU-BLAST,
BLAST2 and PSI-BLAST all rely on common code and are in one single module
(called Grit::AlnParse)




===== Bioperl Project General Mailing List Message Footer =======
Project URL: http://www.techfak.uni-bielefeld.de/bcd/Perl/Bio/
For info about how to (un)subscribe, where messages are archived, etc:
http://www.techfak.uni-bielefeld.de/bcd/Perl/Bio/vsns-bcd-perl.html