[Biojava-l] BioJava, oracle problem with jdk

[Steve Darnell]

Hi Radomir,

I expect you must be using a Mac with a PPC or 32-bit Intel CPU. Apple Java 6 is not available for PPC architecture nor 32-bit Intel machines running OS X 10.5 or lower. Java 6 is available on Windows XP/Vista/7, Linux, and Mac OS X 10.5 (64-bit only)/10.6+.

If you must use Java 5, your options are:

* Build BioJava yourself (as Amr suggested): http://biojava.org/wiki/Get_source, http://biojava.org/wiki/BioJava3_eclipse
* Try SoyLatte: http://landonf.bikemonkey.org/static/soylatte/, Java 6 port for Mac OS X 10.4, 10.5 (Intel)

If you go the SoyLatte route, be prepared to pray for it to work. It is several years old. If it were me, I'd update my Mac to 10.6 then hope the mainboard doesn't fail. I'm not a huge fan of 10.7+, but I'll be forced to go there eventually.

~Steve

-----Original Message-----
From: biojava-l-bounces at lists.open-bio.org [mailto:biojava-l-bounces at lists.open-bio.org] On Behalf Of Radomir
Sent: Wednesday, February 06, 2013 1:04 AM
To: biojava-l at lists.open-bio.org
Subject: [Biojava-l] BioJava, oracle problem with jdk


Hello, i`m trying to apply my project with oracle and biojava. I`m trying to make a database for pairwise alignment ( FATCAT or CE ). These algorithms are in biojava3+ packages. When i`m loading jar`s to mine database i got error ( oracle is running on 1.5 jdk and biojava 3 is compiled on 1.6, there are no chances to upgrade jdk on oracle ).. I find on biojava wiki that version 3.0 of biojava is running on 1.5+ but when i loaded these version to my database there was the same error. Here is my question - is there any chances to get biojava 3 compiled with jdk 1.5 ? ? Sorry for my english
--
View this message in context: http://old.nabble.com/BioJava%2C-oracle-problem-with-jdk-tp34984653p34984653.html
Sent from the BioJava mailing list archive at Nabble.com.

_______________________________________________
Biojava-l mailing list  -  Biojava-l at lists.open-bio.org http://lists.open-bio.org/mailman/listinfo/biojava-l