[Biojava-l] Intsall Problems
Orion Hunter
orion2480 at hotmail.com
Fri Feb 27 16:11:47 EST 2004
In case it makes a difference, I forgot to mention that I am using
j2sdk1.5.0beta on an Intel based RedHat 9.1 machine.
Matt
p.s. Sorry for the "intsall" mispell
>From: "Orion Hunter" <orion2480 at hotmail.com>
>To: biojava-l at biojava.org
>Subject: [Biojava-l] Intsall Problems
>Date: Fri, 27 Feb 2004 20:39:21 +0000
>
>I am trying to install biojava. I d/l biojava1.3.1, unziped and untarred
>it. I installed ANT, but I am confused. It specifies to execute ANT from
>the "biojava-live" directory, but I cannot find this directory, nor any
>build.xml files anywhere.
>
>So, then I try to download the jar file. I download all three required
>files (biojava.jar, bytecode.jar, and xerces.jar). I add them to my
>classpath (and have confirmed that the classpath is correct and is
>remembered by the machine in my env).
>
>So, with a set of jars, I decided to try out the demo. Following the
>instructions on the website (in the "getting started" section), I cd to the
>demos/, and type the following:
>
>/home/user/biojava/>javac seq/TestEmbl.java
>
>I get a whole slew of errors, of which all look like they have to do with
>the fact that it can't find the packages in org.biojava.bio, etc. Now, I
>can see this package structure in
>
>/home/user/biojava/main/org/biojava/bio, etc.
>
>And I was trying to execute from /home/user/biojava/demos
>
>So, why can't it find the packages? I'm not new to java, but it's been a
>long time since I've had to deal with packages, and I can't recall how to
>make biojava see where the packages are located. Any suggestions?
>
>_________________________________________________________________
>Say good-bye to spam, viruses and pop-ups with MSN Premium -- free trial
>offer! http://click.atdmt.com/AVE/go/onm00200359ave/direct/01/
>
>_______________________________________________
>Biojava-l mailing list - Biojava-l at biojava.org
>http://biojava.org/mailman/listinfo/biojava-l
_________________________________________________________________
Get a FREE online computer virus scan from McAfee when you click here.
http://clinic.mcafee.com/clinic/ibuy/campaign.asp?cid=3963
More information about the Biojava-l
mailing list