[Biojava-l] Java implementation of Net-BLAST

[Juha Muilu]

Hi Jean-Marie,

You may be interested in having a look AppLab analysis server stuff. It
provides OMG standard API for accessing applications, not just BLAST and
not only from Java.

The pkg contains also ready made java clients you can use or you can
write easily your own. 

The page is http://corba.ebi.ac.uk/openBSA

Regards, Juha


Jean-Marie Buerstedde wrote:
> 
> I am interested to implement something similar to the Netblast program
> of GCG using JAVA. The program would take a sequence and other
> parameters, send this to NCBI, and get the BLAST report back. I think
> this would be quite useful for a number of laboratories.
> This program would also complement the sequencing and sequence analysis
> software called FOUNTAIN
> (http://genetics.hpi.uni-hamburg.de/FOUNTAIN.html) which we are
> developing.
> Does anything like this exists allready in JAVA?
> 
> Many thanks for help or suggestions,
> Jean-Marie
> --
> Jean-Marie Buerstedde
> Heinrich-Pette-Institute
> Martinistr. 52
> D-20251 Hamburg, Germany
> Tel: 49 40 48051 290
> Fax: 49 40 48051 296
> http://genetics.hpi.uni-hamburg.de/index.html
> _______________________________________________
> Biojava-l mailing list  -  Biojava-l@biojava.org
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 |Juha Muilu, Ph.D., EMBL Outstation| Email:  muilu@ebi.ac.uk         |
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