[Biojava-l] Java code ???

[Mark Schreiber]

I have been developing some objects for personal use, most are still in
the experimental stage and it sounds like some of the work overlaps that
of the Sanger centre.

As someone who is new to this game how would I go about submitting it,
what are the requirements for documentation etc? Is it even useful??

- Mark

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Mark Schreiber			Ph: 64 3 4797875
Rm 218				email mark_s@sanger.otago.ac.nz
Department of Biochemistry	email m.schreiber@clear.net.nz
University of Otago		
PO Box 56
Dunedin
New Zealand
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~


On Thu, 20 Jan 2000, Thomas Down wrote:

> Hi...
> 
> On Wed, Jan 19, 2000 at 11:49:14AM -0800, Ann Loraine wrote:
> > 
> > I just joined the biojava list.
> > 
> > Is there a cvs repository on-line for this site?  
> 
> There isn't a public CVS repository yet, to the best
> of my knowledge (although it would certainly be nice
> to have one set up).  There is, however, some code
> that has been written: several people at the Sanger
> Centre have been working on some BioJava objects,
> with an eye towards scriptability.
> 
> Areas covered at the moment include:
> 
>   - Core bioinformatics interfaces and classes
>     (e.g. Sequence)
> 
>   - Markov models and dynamic programming.
> 
>   - Object model for accessing ACeDB databases
>     (requires the forthcoming ACeDB 4.8 server).
> 
>   - The beginnings of a statistics toolkit,
>     including a Support Vector Machine implementation.
> 
> Most core components are now quite stable, and we're hoping
> to have a release ready some time next month.
> 
> Is anyone else developing any code which could come under
> the `BioJava' heading?
> 
> Thanks,
> 
>    Thomas.
> -- 
> ``Science is magic that works''  -- Kurt Vonnegut.
> 
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