[MOBY-l] BioMoby Problems

[Andreas Groscurth]

Hi Jerzy,

what did you try to compile from SimpleClient ? Did you put the example 
of the client in a separate project or what  ?
For compiling jmoby you should not use javac - there is an ant file 
which does everything you need to do. Its handy, because it handles all 
classpaths for you.

If you want to create your own little client (you can also use the ones 
in moby-live/Java/build/run !) - you need the jars from moby (mhm which 
are in the maven directory actually - see 
moby-live/Java/build/run/run-dashboard as an example) add them to your 
classpath of your java class and run your client.

Although it might be too much examples - i like to point you to 
http://www.eu-sol.net/science/bioinformatics/tutorials/jmoby-step-by-step/writing-a-biomoby-client 
- where we offer another simple client for java as an eclipse project. 
It contains already all required libraries and offers some features you 
can read at the page

For any further questions feel free to ask
Andreas

Jerzy Orlowski wrote:
> I also tried compiling some java code from:
>
> http://biomoby.open-bio.org/CVS_CONTENT/moby-live/Java/docs/SimpleClient.html 
>
>
> First, I had to set the classpath to moby-live/Java/build/classes (It 
> took me a lot of time to find out where it is).
> Then I got an error:
>
> ../test/HelloMOBY2.java:5: HelloMOBY2 is not abstract and does not 
> override abstract method start(org.biomoby.client.MobyRequestEvent) in 
> org.biomoby.client.MobyRequestEventHandler
> public class HelloMOBY2 implements MobyRequestEventHandler{
>      ^
>
> When I created This method (doing nothing) i managed to compile the 
> code wit javac, but I got error with java:
>
> Exception in thread "main" java.lang.NoClassDefFoundError: 
> org/apache/axis/AxisFault
>       at HelloMOBY2.main(HelloMOBY2.java:8)
>
> I got stucked
>
> Best Regards
>
> Jerzy Orlowski
>
>
>
>
>
>
>
>
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