[MOBY] Re: [MOBY-l] A Java web service problem

[Mark Wilkinson]

Debugging using the CGI client is not a good idea, since it will die
"gracefully" under most failures.  "Service returned no response"
generally means that it DID return a response, but the content of the
response was empty or uninterpretable.

Stick to the command-line clients for debugging, under most
circumstances.

Viji - do you have any advice in this situation?

M

On Thu, 2004-03-04 at 02:36, Michael Gruenberger wrote:
> The CGI client output error message:
> 
> BioMOBY Service: getPBfromGO
> consumes a Gene Ontology accession number and returns a collection of
> associated Pathbase accession numbers. 
> ________________________________________________________________________
> Result for GO:0005224
> Service returned no response
> 
> ===================================================================
> 
> scripts/debugYourService www.pathbase.net getPBfromGO scripts/goid.moby:
> 
> It just outputs the Base64 encoded message again. It doesn't decode it.
> No error message as far as I can see. Here the relevant part of the
> output (with the Base64 stuff cut short):
> 
> 
> ...
> Date: Thu, 04 Mar 2004 10:29:32 GMT
> Server: Apache Coyote/1.0
> Content-Type: text/xml; charset=utf-8
> Client-Date: Thu, 04 Mar 2004 10:29:14 GMT
> Client-Response-Num: 1
> Client-Transfer-Encoding: chunked
> Set-Cookie: JSESSIONID=47867777393E99565BDE4F04BFBF9585; Path=/axis
> 
> <?xml version="1.0" encoding="UTF-8"?>
> <soapenv:Envelope
> xmlns:soapenv="http://schemas.xmlsoap.org/soap/envelope/"
> xmlns:xsd="http://www.w3.org/1999/XMLSchema"
> xmlns:xsi="http://www.w3.org/1999/XMLSchema-instance">
>  <soapenv:Body>
>   <ns1:getPBfromGOResponse
> soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/"
> xmlns:ns1="http://biomoby.org/">
>    <ns1:getPBfromGOReturn xsi:type="ns2:base64Binary"
> xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
> xmlns:ns2="http://www.w3.org/2001/XMLSchema">ck8wQUJYUUNORHc[cut]...[cut]JQ0FnUEM5dGIySjVPazFQUWxrKwpDZz09</ns1:getPBfromGOReturn>
>   </ns1:getPBfromGOResponse>
>  </soapenv:Body>
> </soapenv:Envelope>
> SOAP::Deserializer::deserialize: ()
> SOAP::Parser::decode: ()
> SOAP::SOM::new: ()
> rO0ABX[cut]...[cut]C9tb2J5Ok1PQlk+
> Cg==SOAP::Data::DESTROY: ()
> SOAP::Data::DESTROY: ()
> ....
> 
> 
> On Thu, 2004-03-04 at 10:05, Martin Senger wrote:
> > > still doesn't decode it and Marks CGI client still gives the same error
> > > message.
> > >
> >    What does the error message say?
> >  
> >    Martin
> 
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-- 
Mark Wilkinson (mwilkinson at mrl.ubc.ca)
University of British Columbia iCAPTURE Centre