[MOBY-l] New GO service at BDGP.

[Bradley Marshall]

I've got a new service up that outputs GO terms.  Here's the info from the
registration script:

my $reg = $Central->registerService(
 "RetrieveGOFromKeywords",    # subroutine name called by SOAP server
 "Retrieve",      # serviceType
 '"flybase.org', # Authority URI
 ["Object"],    # input object
 ["GO_Term"],     # output object
 ["Generic/Keyword"],    # namespace
 "http://toy.lbl.gov:8088/cgi-bin/moby/go_service.cgi",  # URL of SOAP server
CGI script
 "Returns all GO_term objects related to input keyword(s)", # service
description
 );

Most of this was done by
Mark, I just installed the script and made a simple client script.  SInce I'm
still learning the nuts and bolts I imagine some of this info will change.  For
examaple, is 'Generic/Keyword' really an appropriate namespace for this
service? I've attatched the client script.  Here's a simple example:

./brads_moby_client.pl transcription 'transcription factor'     

You can also search with a wildcard, like 'transcription*'. Here's the output
of the above example:

################## begin output

I guess I'm looking for any services that search by keyword?  So far only GO?
 
Found:
        From: flybase.org
        Name: RetrieveGOFromKeywords
        Type: Retrieve
        Desc: GO_Term;'Returns all GO_term objects related to input keyword(s)'
 
Executing Service: RetrieveGOFromKeywords with GO_term=neuroligin
<MOBY
AuthURI='http://flybase.org'>
 <GO_Term namespace='GO/Acc' id='GO:0006350'>
  <Term>transcription</Term>
  <Definition></Definition>
  <Type>biological_process</Type>
 </GO_Term>
 <GO_Term namespace='GO/Acc' id='GO:0003700'>
  <Term>transcription factor</Term>
  <Definition>Any protein required to initiate or regulate transcription;
includes both gene regulatory proteins as well as the general transcription
factors.</Definition>
  <Type>molecular_function</Type>
 </GO_Term>
</MOBY>

############################ end output

Brad
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