[Biojava-dev] I would like to take ownership of Port genbank parser from biojava 1 to biojava 3

Michael Heuer heuermh at gmail.com
Thu Jun 20 15:25:18 UTC 2013


Hello Charles,

Sounds good, but the target package you want is

org.biojava3.core.sequence.io

   michael


On Thu, Jun 20, 2013 at 12:22 AM, Charles Stockman
<chuck.stockman at yahoo.com> wrote:
> Before I ask my question(s) let me thank Andreas Prloic for his help in getting my started.
>
> I believe that I am ready to start my first bug.  The bug that chosen is
>
> Port genbank parser from biojava 1 to biojava 3, but I have a few questions.
>
> 1. How can I get this enhancement assigned to me.
>
> 2. After looking over the code the legacy code, I believe the best goal is to
>
>
>     port the test files starting with Genbank from directory
>
>            biojava-legacy-1.8.2-src/core/src/test/java/org/biojavax/bio/seq/io
>
>     To the new directory in biojava 3
>
>
>             org.biojava3.sequencing.io.genbank and org.biojava3.sequencing..io.genbank.
>
> I will port both the source cost and the files that will be tested.
>
> 3. While I am porting the code, is there any other bugs/enhancement that I should also work into the port.
>
> Thank you very much for your help
>
> Charles Stockman
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev



More information about the biojava-dev mailing list