[Biojava-dev] today's update

Mark Schreiber markjschreiber at gmail.com
Wed Sep 2 02:51:32 UTC 2009


I think the demos apps and docs dirs are all badly out of date and should be
dropped. Going forward material like this should go to the wiki.

On Sep 2, 2009 10:44 AM, "Andreas Prlic" <andreas at sdsc.edu> wrote:

* fixed the synchronisation problems with the JUnit tests.
* started to work on the das module
* general refactoring.  The whole feels much more stable now.

Still missing:

* demos and apps subdirectories. Shall I move them to a biojava-demos
module?
* Can we drop the docs dir? if this is relevant it should be moved to the
wiki.
* refactor the biosql code to its module
* signing - need to re-enable the digital signature
* need to update cruisecontrol to use maven instead of ant


Done:
The following modules have been refactored and mavenized so far:
* alignment, blast, structure, phylo, sequence, sequencing

Did I miss anything?

Andreas
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