[MOBY-l] ocal Central installation

Edward Kawas edward.kawas at gmail.com
Mon Jun 14 13:15:58 UTC 2010


Hi Marc,

Please refer to the following webpage
http://biomoby.open-bio.org/index.php/for-developers/. There is a section
called "Installation of Local Registry" that may be of some help for you.

Eddie

> -----Original Message-----
> From: moby-l-bounces at lists.open-bio.org [mailto:moby-l-
> bounces at lists.open-bio.org] On Behalf Of Marc Logghe
> Sent: Sunday, June 13, 2010 11:58 PM
> To: moby-l at lists.open-bio.org
> Subject: [MOBY-l] ocal Central installation
> 
> Hi,
> A local install of the MOBY-central seems be successful, at least the test
> scripts are working.
> 
> However when I import biomoby services in taverna 2.1.2 you get an error
> "can't update the biomoby cache".
> In apache access.log you can find the following:
> 10.0.10.227 - - [11/Jun/2010:16:11:03 +0200] "POST /biomoby/cgi-bin/MOBY-
> Central.pl HTTP/1.0" 200 1039 "-" "Axis/1.4"
> 10.0.10.227 - - [11/Jun/2010:16:11:03 +0200] "POST /biomoby/cgi-bin/MOBY-
> Central.pl HTTP/1.0" 200 1039 "-" "Axis/1.4"
> 10.0.10.227 - - [11/Jun/2010:16:11:04 +0200] "POST /biomoby/cgi-bin/MOBY-
> Central.pl HTTP/1.0" 200 291210 "-" "Axis/1.4"
> 10.0.10.227 - - [11/Jun/2010:16:11:04 +0200] "GET
> /authority/RESOURCES/MOBY-S/Objects HTTP/1.1" 404 318 "-" "jmoby-
> central/1.0"
> 10.0.10.227 - - [11/Jun/2010:16:11:04 +0200] "GET
> /authority/RESOURCES/MOBY-S/ServiceInstances HTTP/1.1" 404 327 "-"
> "jmoby-central/1.0"
> 10.0.10.227 - - [11/Jun/2010:16:45:38 +0200] "GET
> /authority/RESOURCES/MOBY-S/Objects HTTP/1.1" 404 318 "-" "jmoby-
> central/1.0"
> 10.0.10.227 - - [11/Jun/2010:16:45:38 +0200] "POST /biomoby/cgi-bin/MOBY-
> Central.pl HTTP/1.0" 200 1039 "-" "Axis/1.4"
> 10.0.10.227 - - [11/Jun/2010:16:45:38 +0200] "POST /biomoby/cgi-bin/MOBY-
> Central.pl HTTP/1.0" 200 291210 "-" "Axis/1.4"
> 10.0.10.227 - - [11/Jun/2010:16:45:39 +0200] "GET
> /authority/RESOURCES/MOBY-S/ServiceInstances HTTP/1.1" 404 327 "-"
> "jmoby-central/1.0"
> 
> Also, in error.log one can find "File does not exist:
/var/www/html/authority"
> 
> So, apparently taverna is requesting for some urls that don't exist
> (/authority/...).
> I don't know what to do here.
> The URLs seem to exist at http://moby.ucalgary.ca.
> 
> Found an authority.pl script in the Perl/MOBY-Server folder but not sure
> what to do with it.
> 
> Regards,
> Marc
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