[MOBY-l] [moby] Question about Object Ontology

Mark Wilkinson markw at illuminae.com
Tue Mar 7 20:21:24 UTC 2006


On Tue, 2006-03-07 at 15:13 -0500, Sean Zhou wrote:

> But unfortunately, the
> url (http://mobycentral.icapture.ubc.ca/RESOURCES/MOBY-S/Objects/) you
> provided didn't give me the object ontology file that I wished to download. 

Ummm.... there's only one Object ontology, so if that isn't the one you
wanted, then you're a bit stuck :-)


> I've also tried the CVS-> moby-live
> (http://cvs.open-bio.org/cgi-bin/viewcvs/viewcvs.cgi/moby-live/?cvsroot=biomo
> by). But not sure which one I should dig into. The object ontology is
> definitely I want. 

The ontologies are not in the CVS - the only ways to get them are
through the URL that I gave you, or through the API.




> Also, I wonder whether there is a service-ontology too.

http://mobycentral.icapture.ubc.ca/RESOURCES/MOBY-S/Services/


> the username and password didn't work. This problem actually has been
> mentioned in the previous discussion (
> http://biomoby.org/pipermail/moby-l/2005-July/002612.html). But it is not
> solved.

I'll have to let Yan answer that one... 

Why is the ontology from that URL not what you wanted?  What are you
hoping for?

M


-- 

--
Mark Wilkinson
Asst. Professor, Dept. of Medical Genetics
University of British Columbia
PI in Bioinformatics, iCAPTURE Centre
St. Paul's Hospital, Rm. 166, 1081 Burrard St.
Vancouver, BC, V6Z 1Y6
tel: 604 682 2344 x62129
fax: 604 806 9274

"For most of this century we have viewed communications as a conduit, 
       a pipe between physical locations on the planet. 
What's happened now is that the conduit has become so big and interesting 
      that communication has become more than a conduit, 
       it has become a destination in its own right..."

                Paul Saffo - Director, Institute for the Future




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