[MOBY-l] NameSpace for AGRICOLA?

[Midori Harris]

Hi,

OK; I didn't appreciate that NAL call numbers aresn't unique. Do you mind
if I forward your message to the GO mailing list? I would like the TAIR
and TIGR groups to comment before we change, since GO is already using
what is in the GO.xry_abbs file.

Midori

On Fri, 5 Sep 2003, Vijay Narayanasamy wrote:

> Hi Midori,
> 
>  
> 
> Thanks. But NAL Call number does not appear to be unique. See the following.
> Same Call number for 5 records. 
> 
> 
> 
> Heading 
> 
> Information 
> 
> Call number 
> 
>  
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-04760&conf=010000++++
> ++++++++++> RC620
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-04760&conf=010000++++
> ++++++++++>  A1N8 
> 
> 
> AUTHOR 
> 
> Yen,
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=author&conf=010000+
> +++++++++++++&searcharg=Yen%2c+J.T.+USDA%2c+ARS%2c+Roman+L.+Hruska+U.S>
> J.T. USDA, ARS, Roman L. Hruska U.S. Meat Animal 
> 
> 
> TITLE 
> 
> Response
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=title&conf=010000++
> ++++++++++++&searcharg=Response+of+weanling+pigs+to+dietary+sup>  of
> weanling pigs to dietary supplementation of 
> 
> Call number 
>  
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-04860&conf=010000++++
> ++++++++++> RC620
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-04860&conf=010000++++
> ++++++++++>  A1N8 
> 
> 
> AUTHOR 
> 
> Nowak,
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=author&conf=010000+
> +++++++++++++&searcharg=Nowak%2c+J.+Cornell+University%2c+Geneva%2c+NY>  J.
> Cornell University, Geneva, NY. 
> 
> 
> TITLE 
> 
> Effect
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=title&conf=010000++
> ++++++++++++&searcharg=Effect+of+tempeh+fermentation+of+peas+on>  of tempeh
> fermentation of peas on their potential 
> 
> Call number 
> 
>  
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-04960&conf=010000++++
> ++++++++++> RC620
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-04960&conf=010000++++
> ++++++++++>  A1N8 
> 
> 
> AUTHOR 
> 
> Newman,
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=author&conf=010000+
> +++++++++++++&searcharg=Newman%2c+C.W.+Montana+State+University%2c+B>  C.W.
> Montana State University, Bozeman. 
> 
> 
> TITLE 
> 
> A
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=title&conf=010000++
> ++++++++++++&searcharg=comparison+of+Alaskan+fish+meals+to+soyb>  comparison
> of Alaskan fish meals to soybean meals as 
> 
> 
> Call number 
> 
>  
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-05060&conf=010000++++
> ++++++++++> RC620
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-05060&conf=010000++++
> ++++++++++>  A1N8 
> 
> 
> AUTHOR 
> 
> Brown,
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=author&conf=010000+
> +++++++++++++&searcharg=Brown%2c+W.F.+University+of+Florida%2c+Ona%2c+>
> W.F. University of Florida, Ona, FL. 
> 
> 
> TITLE 
> 
> Intake
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=title&conf=010000++
> ++++++++++++&searcharg=Intake+and+digestibility+of%2c+and+perform>  and
> digestibility of, and performance by, cattle 
> 
> 
> Call number 
> 
>  
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-05160&conf=010000++++
> ++++++++++> RC620
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-05160&conf=010000++++
> ++++++++++>  A1N8 
> 
> 
> AUTHOR 
> 
> Yokogoshi,
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=author&conf=010000+
> +++++++++++++&searcharg=Yokogoshi%2c+H.+The+University+of+Shizuoka>  H. The
> University of Shizuoka, Shizuoka, Japan. 
> 
> 
> TITLE 
> 
> Acute
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?searchtype=title&conf=010000++
> ++++++++++++&searcharg=Acute+effects+of+various+carbohydrates+o>  effects of
> various carbohydrates on brain serotonin 
> 
> 
> What I am using to uniquely identify and retrieve a record is
> "bib" from the URL
> For example bib=0000-05160 in the following URL
> 
> 
> http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-05160
> <http://www.nal.usda.gov/cgi-bin/agricola-ind?bib=0000-05160&conf=010000>
> &conf=010000++++++++++++++
> 
> "bib" value has a tag "035" in MARC record.
> 
> Since NAL is reserved for call number. I would like to get another namespace
> for AGRICOLA.
> 
> Any suggestions?
> 
> Thanks,
> 
> Vijay
> 
> 
> Vijay Narayanasamy
> Project Programmer / Analyst
> Bioinformatics Program, Human and Molecular Genetics Center
> Medical College of Wisconsin
> 8701, W. Watertown Plank Road
> Milwaukee, WI 53226
> 414-456-8026
> vnarayan at mcw.edu 
> http://brc.mcw.edu/ 
> 
>  
> 
>  
> 
> -----Original Message-----
> From: Midori Harris [mailto:midori at ebi.ac.uk] 
> Sent: Friday, September 05, 2003 3:32 AM
> To: Vijay Narayanasamy
> Cc: MOBY (moby-l at biomoby.org)
> Subject: Re: [MOBY-l] NameSpace for AGRICOLA?
> 
>  
> 
> Hi,
> 
>  
> 
> This is in go/doc/GO.xrf_abbs:
> 
>  
> 
>    abbreviation: NAL
> 
>    database: AGRICOLA
> 
>    object: call number
> 
>    example: NAL:TP248.2 P76 v.14
> 
>    generic_url: http://www.nal.usda.gov/ag98/ag98.html
> 
>  
> 
> I got the information from Linda Hannick at TIGR; I think it's this way
> 
> round (rather than abbreviation:AGRICOLA) because the IDs are NAL call
> 
> numbers.
> 
>  
> 
> Midori
> 
>  
> 
> On Thu, 4 Sep 2003, Vijay Narayanasamy wrote:
> 
>  
> 
> > Hi,
> 
> > 
> 
> > Is there any namespace for articles from AGRICOLA database? I propose
> 
> > AGRICOLA. Any suggestions?
> 
> > 
> 
> > I have a MOBY Service running in my local MOBY Central that retrieves
> 
> > AGRICOLA MARC records for a given query, parses them to produce documents
> in
> 
> > MEDLINE Display format.
> 
> > 
> 
> > I need a new namespace for AGRICOLA.
> 
> > 
> 
> > 
> 
> > --Vj
> 
> > 
> 
> > 
> 
> > Vijay Narayanasamy
> 
> > Project Programmer / Analyst
> 
> > Bioinformatics Program, Human and Molecular Genetics Center
> 
> > Medical College of Wisconsin
> 
> > 8701, W. Watertown Plank Road
> 
> > Milwaukee, WI 53226
> 
> > 414-456-8026
> 
> > vnarayan at mcw.edu 
> 
> > http://brc.mcw.edu/ 
> 
> > 
> 
> > 
> 
> > _______________________________________________
> 
> > moby-l mailing list
> 
> > moby-l at biomoby.org
> 
> > http://biomoby.org/mailman/listinfo/moby-l
> 
> > 
> 
>  
> 
>