[MOBY-dev] Help with the featureClient

[Edward Kawas]

Hi Lucas,

Look at the following page:

http://biomoby.open-bio.org/CVS_CONTENT/moby-live/Java/docs/FeatureClient.ht
ml

Unfortunately, like Martin said, there are many dependencies required for
most of the biomoby functionality and so you cannot simply run most clients
using java -jar.

Eddie

-----Original Message-----
From: moby-dev-bounces at lists.open-bio.org
[mailto:moby-dev-bounces at lists.open-bio.org] On Behalf Of Lucas Amorim
Sent: Saturday, October 23, 2010 5:32 PM
To: moby-dev at lists.open-bio.org
Subject: [MOBY-dev] Help with the featureClient

Hello,

I don't know if this is the appropriate mailing list, if not, please point
me to the right one. Or just answer me :D I am trying to use jmoby for a
datamining project I am in, but, before diving into the real task, I would
like to run the FeatureClient example they have, but when I try to run it
like this:  java -jar FeatureClient.jar SimpleSingleCall, i get a lot of
java related errors I can't understand (C++ programmer), such as:

neutron:featureClient lucas$ java -jar FeatureClient.jar SimpleSingleCall
Exception in thread "main" java.lang.NoClassDefFoundError:
org/apache/axis/AxisFault
        at
de.mpg.mpiz_koeln.pcb.featureClient.FeatureClient.<init>(FeatureClient.java:
93)
        at
de.mpg.mpiz_koeln.pcb.featureClient.test.SimpleSingleCall.main(SimpleSingleC
all.java:18)
        at
de.mpg.mpiz_koeln.pcb.featureClient.test.FeatureClientFactory.main(FeatureCl
ientFactory.java:40)
Caused by: java.lang.ClassNotFoundException: org.apache.axis.AxisFault
        at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
        at java.security.AccessController.doPrivileged(Native Method)
        at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
        at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
        at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
        ... 3 more
neutron:featureClient lucas$

Can you please help me? I have tried it with different sun java versions and
also on mac (above) and on linux.

Thanks in advance!

Lucas Amorim

Instituto de Computação
Universidade Federal de Alagoas
Curriculum Lattes: http://lattes.cnpq.br/2470781099632240

Linux User #425305

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