[MOBY-dev] [moby] BioMOBY at the Oscars

Stian Soiland ssoiland at cs.man.ac.uk
Wed Mar 8 16:51:58 UTC 2006


On 8. mar. 2006, at 16:25, Mark Wilkinson wrote:

> urn:lsid:biomoby.org:serviceinstance:org.inab.upc,runFasty: 
> 2006-03-04T08-50-58Z

This seems like an OK example, but maybe not a good match for our task.

> does that help?  What, specifically, are you looking for in the  
> RDF?  A
> comprehensive use of all of the predicates, or a "gold standard" for
> what we consider to be a well-documented (i.e. described) service?

More specifically we are looking for good examples of semantic  
descriptions that we can use for Taverna while developing semantic  
linking/browsing/searching. In particular, descriptions of inputs and  
outputs that are a bit more specific than "Object", so that we can  
build GUI elements in Taverna for use cases like this rough description:

a) Add a BioMoby processor into the Taverna workflow
b) Click on the process, find that the input is a string described as  
a "GCP_Phenotype"
c) Browse a list of BioMoby services that can provide the output type  
"GCP_Phenotype"
d) Add one of the services to the workflow and connect it

Of course, limiting the search by "performs task NCBI_Blast" is also  
nice.


So a good example would be one (or a few related) services that has  
this kind of information specified and that actually works. :-)

-- 
Stian Soiland
School of Computer Science
The University of Manchester
http://www.cs.man.ac.uk/~ssoiland/




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