[MOBY-dev] To Whom It May Concern Regarding The Service "RunNCBIBlastn"

Sebastien Carrere Sebastien.Carrere at toulouse.inra.fr
Tue Feb 28 15:06:19 UTC 2006


Hello Pieter,

I agree with you for making this change in the responseHeader sub.
However, shouldn't we rewritte completely this sub to also include Error 
handling in the <serviceNotes> block ?
Maybe this sub should have a "-exception" parameter .

What do you think about this ?

Cordialement,
Sebastien



Pieter Neerincx a écrit :
> On 28-Feb-2006, at 2:05 PM, Martin Senger wrote:
>
>   
>>> I'm not sure who runs the service "RunNCBIBlastn", but when I get an
>>> exception returned, it comes in a ServiceNotes tag, not a  
>>> serviceNotes
>>> tag (note capitalization).
>>>
>>>       
>>    BTW, both are wrong, of course: it should be in
>> <serviceNotes><Notes>...</Notes></serviceNotes>.
>>     
>
> Which reminds me: in Perl MOBY/Commonsubs.pm also still generates  
> <serviceNotes>...</serviceNotes>. So basically all the services that  
> use the Perl API are incompatible as well :(. Does Anyone have  
> objections if I change that to <serviceNotes><Notes>...</Notes></ 
> serviceNotes>?
>
> Cheers,
>
> Pi
>
>   
>>    Martin
>>
>> -- 
>> Martin Senger
>>    email: martin.senger at gmail.com
>>    skype: martinsenger
>> consulting for:
>>    International Rice Research Institute
>>    Biometrics and Bioinformatics Unit
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>>    Philippines, phone: +63-2-580-5600 (ext.2324)
>>
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>
>
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Sebastien CARRERE                        LIPM (INRA-CNRS)
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