[moby] [MOBY-dev] Problem with Biomoby 0.8.2 Perl libraries

Arnaud Kerhornou axk at sanger.ac.uk
Tue Jul 19 15:01:08 UTC 2005


Hi Mark,

I have downloaded the new release, and the script works fine now,

Thanks
Arnaud

Mark Wilkinson wrote:

>I've just packaged up another release (0.8.2a) that includes fixes for
>the 0.8.2 release bugs that have been reported so far. 
>
>Please try this one and tell me if it still causes problems.
>
>M
>
>
>On Tue, 2005-07-19 at 16:30 +0200, Arnaud Kerhornou wrote:
>  
>
>>Hi,
>>
>>I am working for the INB in Spain setting up Moby Web services, and I am 
>>trying to switch my code to use the new release, BioMoby 0.8.2 (was 
>>using BioMoby 0.8.1 before).
>>
>>I have a client script that is interrogating a registry server and ask 
>>for a given service. If the registry server is the following one, 
>>http://mobycentral.icapture.ubc.ca/MOBY/Central, it works fine but if I 
>>want to interrogate another one, I am getting an error.
>>
>>I am instanciating a Central object with the following parameters,
>>
>>    => URL: http://chirimoyo.ac.uma.es/cgi-bin/MOBY-Central.pl
>>    => URI: http://chirimoyo.ac.uma.es/MOBY/Central
>>    => Proxy: No Proxy Server
>>
>>The instanciation of Central seems to go okay, but then when I want to 
>>execute 'findService' method, I get the following error:
>>------------------------->
>>Can't call method "getValue" on an undefined value at 
>>/home/ug/arnau/lib/biomoby.0.8.2/Perl/MOBY/Client/Central.pm line 1728
>><-------------------------
>>
>>Central.pm line 1728 is the following one (in _parseServices method)
>>
>>my $lsid = $Service->getAttributeNode('lsid')->getValue;
>>
>>Any clue of what is going wrong or do I need to update my client code ?
>>
>>Thanks
>>Arnaud
>>
>>	
>>
>>	
>>		
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>>    
>>

	

	
		
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