[GSoC] 3rd coding week blog post

[Eric Talevich]

OK, makes sense. Do you have another public repository where your GSoC code
will be hosted? I'm not very familiar with Darcs, so I'm not sure whether
it makes more sense to have a branch for your work in Ketil's repo (like
SourceForge), or as a fork that you control entirely (like GitHub). Either
way, the goal is to ensure that your GSoC code is publicly available.

On Tue, Jun 3, 2014 at 4:23 AM, Sarah Berkemer <sarah.berkemer at gmail.com>
wrote:

> Hey,
>
> the code is written by Ketil Malde and can be downloaded here:
> http://malde.org/~ketil/biohaskell/transalign/ . I probably should
> include this into my blog.
> The 'transalign_prof' version is just the version where I put in some
> flags to get more detailed statistics. And yes, I did the plots with this
> program and the Haskell profiling library :) .
>
> Sarah
>
>
> On Mon, Jun 2, 2014 at 5:19 PM, Eric Talevich <eric.talevich at gmail.com>
> wrote:
>
>> Hi Sarah,
>>
>> This looks very cool so far. Can you point me to the source code for the
>> script transalign_prof, and was that the same program that generated
>> those nice plots on the wiki?
>>
>> Thanks,
>> Eric
>>
>>
>>
>>
>> On Mon, Jun 2, 2014 at 6:49 AM, Sarah Berkemer <sarah.berkemer at gmail.com>
>> wrote:
>>
>>> Hello,
>>>
>>> here is my blogpost and plan for the third coding week.
>>> In the last week, I did a time and space profiling analysis, showing
>>> which
>>> methods are the ones which have the most time and space consumption.
>>> Here http://biohaskell.org/GSoC_blog/Weeks_1and2 , you can find the
>>> results
>>> of the analysis, including plots.
>>> Now, I know which methods have to be changed. In this week I plan to
>>> fully
>>> understand those methods and think about whether to rewrite them or just
>>> change some parts. The plan for this week can be found here:
>>> http://biohaskell.org/GSoC_blog/Weeks_3and4 .
>>>
>>> Sarah
>>> _______________________________________________
>>> GSoC mailing list
>>> GSoC at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/gsoc
>>>
>>
>>
>