[EMBOSS] FUZZNUC
Mahmut Uludag
uludag at ebi.ac.uk
Sun Mar 9 20:53:52 UTC 2014
Hi Tala,
I have tried using a pattern file with mEMBOSS 6.5. If i don't add the
prefix '@' character before the pattern file name jemboss provides name
of the file as the input pattern to emboss fuzznuc program which then
returns no hits.
i.e., this pattern file works
@C:\Users\alice\Documents\fuzznuc.pat.txt
however, if i miss the '@' prefix as in the following example, file name
itself is considered as the pattern for search and no hit is found.
C:\Users\alice\Documents\fuzznuc.pat.txt
Please let us know if you still get errors.
-- mahmut
> I am trying to run FUZZNUC in EMBOSSwin and JEMBOSS with a list of
> patterns. Can you advice on how to do that, where I am getting errors with
> @patternfile.txt
>
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