[EMBOSS] What causes this NEEDLE warning?
witch.of.agnessi at gmail.com
Fri Oct 25 16:42:59 UTC 2013
Here's the Pastebin Link for the two sequences pasted as is. The alignment
is generated without any problem I guess. I've checked it with the online
version at EBI
On Fri, Oct 25, 2013 at 8:17 AM, Chenna Ramu <chenna at embl-heidelberg.de>wrote:
> Most probably because of some non-printable ascii characters,
> often the case when you transfer your files from different operating
> systems. You cannot find this by visual inspection.
> The offending line/character should be accompanied with
> the warning. For developers, If the offender is an ASCII char
> then the numerical value of the ascii character should be printed.
> On Fri, 25 Oct 2013, B Enn wrote:
> > Hi,
> > I'm getting the following warning message in NEEDLE:
> > "Warning: Sequence character string not found in ajSeqCvtKS", I've
> > thoroughly and my sequences don't have any other characters than the
> > ATGC.
> > Thanks
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