[EMBOSS] Antwort: Vienna in Emboss/Emboss-Explorer on Ubuntu?

david.bauer at bayer.com david.bauer at bayer.com
Wed Mar 16 09:25:28 UTC 2011


the emboss-explorer creates the html menu on the fly by calling the emboss 
program wossname.
So if you install the Vienna embassy package just in the same place like 
the main emboss, the vrnafold etc. should appear in the emboss-explorer.
But I'm not using it on Ubuntu so I do not know if there are any Ubuntu 
specific issues.


emboss-bounces at lists.open-bio.org schrieb am 15/03/2011 21:49:47:

> One of the ideas I try to teach in my bioinformatics class is RNA 
> folding - and as such I'd love to add an RNA folding algorithm to my
> bioinformatics server.  It seems like the "easiest" path might be 
> Vienna since there's an EMBOSS port of it.  I'm not sure how to 
> proceed, however - I've downloaded the source (VIENNA-1.7.2) and 
> know the rough procedure for getting it installed, but I want it to 
> "hook in" to my existing Ubuntu EMBOSS-Explorer (which is how my 
> students access all of the other analyses we do).  Any ideas how to 
> modify the installation to install to the correct path so that it 
> will be available in my existing applications list?
> Any help appreciated - thanks in advance!
> Wolfgang
> Dr. Wolfgang Rumpf
> Product Specialist, Rescentris Inc.
> Adjunct Faculty, Dept. of Biotechnology, UMUC
> --------------------------------------------------------
> wolfgang.rumpf at rescentris.com
> wolfgang.rumpf at gmail.com
> Mobile - (614) 638-6797
> Skype - wolfgang.rumpf
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