[EMBOSS] diffseq memory problem?
Barretto, Caroline, LAUSANNE, BioInformatics
Caroline.Barretto at rdls.nestle.com
Tue Feb 8 10:01:28 UTC 2011
Dear EMBOSS developers,
I have been using diffseq to compare too strains of the same bacteria
species using "10" as wordsize without any problem.
However, when I try to reduce this number to "4", after several hours of
calculation the server collapses, all RAM and SWAP are used.
Is there any option to avoid that, or do you know if someone is working
on that problem?
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