[EMBOSS] installation verification - automatic detection of missing "cores" for wrappers
David Mathog
mathog at caltech.edu
Sun Nov 1 22:21:58 UTC 2009
It would be _really_ helpful if there was some sort of:
make test_wrappers
or
make find_empty_wrappers
which could be run after
make install
which would show which emboss programs that are just wrappers are
missing the core program that they enable. In random testing I keep
running into new programs on the web menu (W2H or EMBOSS-Explorer) which
blow up when tested because the "real" program isn't present. The
latest, was elipop, which does not work without lipoP. No way to tell
from the names what is a wrapper, and what isn't. epestfind is a
program, elipop is a wrapper. Then searching in the build directory it
turns out that elipop is part of cbstools, and I knew from an earlier
case like this that these are mostly (all?) wrappers.
Thanks,
David Mathog
mathog at caltech.edu
Manager, Sequence Analysis Facility, Biology Division, Caltech
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