[EMBOSS] Trimming illumina short reads based on quality

michael watson (IAH-C) michael.watson at bbsrc.ac.uk
Tue Dec 1 14:33:23 UTC 2009


Hi

I'm sorry if I've not been keeping up to date on what is doubtless a hot topic.

Does EMBOSS allow one to trim short reads based on quality data (from a fastq file)?

If not, I have read that it is planned - any idea when it will be implemented?

Otherwise, alternative suggestions are welcome!

Thanks
Mick





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