[EMBOSS] Jemboss installation error

[Tim Carver]

Hi Eric

This looks to me as if it is trying to run with Gnu Java. You probably need
to set your PATH to point at Sun Java and also make sure it was compiled
with that.

Regards
Tim


On 4/7/09 1:17 AM, "Eric Userlist" <eric.userlist at gmail.com> wrote:

> Hi
> I have installed emboss in an intel redhat machine (Linux 2.6.9-34.ELsmp #1
> SMP Fri Feb 24 16:54:53 EST 2006 i686 i686 i386 GNU/Linux) and tested
> several commands that seem to work. However I get the following errors after
> "successful" installing jemboss:
> 
> Exception in thread "main" java.lang.NoClassDefFoundError:
> org.emboss.jemboss.Jemboss
>    at gnu.gcj.runtime.FirstThread.run() (/usr/lib/libgcj.so.5.0.0)
>    at _Jv_ThreadRun(java.lang.Thread) (/usr/lib/libgcj.so.5.0.0)
>    at _Jv_RunMain(java.lang.Class, byte const, int, byte const, boolean)
> (/usr/lib/libgcj.so.5.0.0)
> 
> I tried to search the emboss website and related discussions in the
> internet. Some people seem to run into similar problems but no solutions
> were offered. I hope to get some help here. Thank you very much!
> 
> Eric
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/emboss




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