[EMBOSS] Prettyplot options

[Tim Carver]

You could try the Jemboss alignment editor.
http://emboss.sourceforge.net/Jemboss/

This does create a single page and you can run it from the command line:

http://emboss.sourceforge.net/Jemboss/jae.html#Command

Regards
Tim

On 22/9/08 12:53, "Peter Rice" <pmr at ebi.ac.uk> wrote:

> simon andrews (BI) wrote:
>> I've been trying to make a nice image of an alignment using prettyplot,
>> but have failed to find the right set of options to get what I want.
>> 
>> I need to get the whole alignment into one image (png), even if that
>> ends up being very long and thin.  At the moment it always seems to
>> paginate.
> 
> An interesting challenge. I will take a look.
> 
> We were limited by the graphics library when we first rewrote prettyplot
> for EMBOSS but we now have more reliable PNG options in plplot.
> 
> Pretyplot scales the plot to fit the page, so you need extra options to
> make the page larger ... and I will make sure all titles and labels can
> be hidden.
> 
> regards,
> 
> Peter
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/emboss




-- 
 The Wellcome Trust Sanger Institute is operated by Genome Research 
 Limited, a charity registered in England with number 1021457 and a 
 company registered in England with number 2742969, whose registered 
 office is 215 Euston Road, London, NW1 2BE.