[EMBOSS] sequence retrieval

Daniel Barker db60 at st-andrews.ac.uk
Wed Jun 11 10:49:12 UTC 2008


Dear Jay,

My simple idea is just something like this:

seqret @id_list.txt

where id_list.txt is something like this:

23214.O_sativa_Nipponbare.fasta:Q9FXT4
23214.O_sativa_Nipponbare.fasta:Q2R8Z5
23214.O_sativa_Nipponbare.fasta:Q10AZ4

(23214.O_sativa_Nipponbare.fasta is a Fasta-format file in the current 
directory.)

This certainly works - however, it may not really match what you're after.

Best wishes,

Daniel

-- 
Daniel Barker
http://bio.st-andrews.ac.uk/staff/db60.htm
The University of St Andrews is a charity registered in Scotland :
No SC013532



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