[EMBOSS] sequence retrieval

Daniel Barker db60 at st-andrews.ac.uk
Tue Jun 10 18:49:51 UTC 2008

Dear Jay,

Are you simply trying to extract specific sequences from a Fasta-format
file? The EMBOSS program to do it is seqret, or maybe seqretsplit:



As Peter Rice suggests, you can do stuff to speed the access up, but
it'll work without that.

Best regards,


Daniel Barker
The University of St Andrews is a charity registered in Scotland :
No SC013532

University of St Andrews Webmail: https://webmail.st-andrews.ac.uk

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